Application of a Database-Independent Approach To Assess the Quality of Operational Taxonomic Unit Picking Methods
نویسندگان
چکیده
منابع مشابه
Application of a Database-Independent Approach To Assess the Quality of Operational Taxonomic Unit Picking Methods
Assignment of 16S rRNA gene sequences to operational taxonomic units (OTUs) allows microbial ecologists to overcome the inconsistencies and biases within bacterial taxonomy and provides a strategy for clustering similar sequences that do not have representatives in a reference database. I have applied the Matthews correlation coefficient to assess the ability of 15 reference-independent and -de...
متن کاملApplication of database-independent approach to assess the quality of OTU picking methods
1 Assigning 16S rRNA gene sequences to operational taxonomic units (OTUs) allows microbial 2 ecologists to overcome the inconsistencies and biases within bacterial taxonomy and provides a 3 strategy for clustering similar sequences that do not have representatives in a reference database. I 4 have applied the Matthew’s correlation coefficient to assess the ability of 15 reference-independent 5 ...
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ژورنال
عنوان ژورنال: mSystems
سال: 2016
ISSN: 2379-5077
DOI: 10.1128/msystems.00027-16